Session Details

[OE5]Oral English Session 5 Statistical Genetics / Bioinformatics

Fri. Dec 16, 2022 11:00 AM - 11:50 AM JST
Fri. Dec 16, 2022 2:00 AM - 2:50 AM UTC
Room 7
Chairs:Ituro Inoue (National Institute of Genetics), Natsuhiko Kumasaka (Genetics Division, Medical Support Center of Japan Environment and Children's Study, National Center for Child Health and Development)

[OE5-1]eQTL analysis for full length transcripts using long-read technology reveals a lot of splicing variant-specific eQTLs

Yuya Nagura, Mihoko Shimada, Akihiro Fujimoto (Department of Human Genetics, Graduate School of Medicine, The University of Tokyo)

[OE5-2]The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force

Qingbo Wang1,2, Ryuya Edahiro1,3, Namkoong Ho4, Takanori Hasegawa5, Makoto Ishii6, Ryuji Koike7, Akinori Kimura8, Seiya Imoto9, Satoru Miyano5, Seishi Ogawa10,11,12, Takanori Kanai13,14, Koichi Fukunaga6, Yukinori Okada1,2,15,16,17,18, Japan Covid-19 Task Force Project4 (1.Department of Statistical Genetics, Graduate School of Medicine, Osaka University, Osaka, Japan, 2.Laboratory of Statistical Immunology, Immunology Frontier Research Center (WPI-IFReC), Osaka University, Suita, Japan., 3.Department of Respiratory Medicine and Clinical Immunology, Osaka University Graduate School of Medicine, Suita, Japan., 4.Department of Infectious Diseases, Keio University School of Medicine, Tokyo, Japan., 5.M&D Data Science Center, Tokyo Medical and Dental University, Tokyo, Japan, 6.Division of Pulmonary Medicine, Department of Medicine, Keio University School of Medicine, Tokyo, Japan, 7.Medical Innovation Promotion Center, Tokyo Medical and Dental University, Tokyo, Japan, 8.Institute of Research, Tokyo Medical and Dental University, Tokyo, Japan, 9.Division of Health Medical Intelligence, Human Genome Center, the Institute of Medical Science, the University of Tokyo, Tokyo, Japan, 10.Department of Pathology and Tumor Biology, Kyoto University, Kyoto, Japan, 11.Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, Japan, 12.Department of Medicine, Center for Hematology and Regenerative Medicine, Karolinska Institute, Stockholm, Sweden, 13.Division of Gastroenterology and Hepatology, Department of Medicine, Keio University School of Medicine, Tokyo, Japan, 14.AMED-CREST, Japan Agency for Medical Research and Development, Tokyo, Japan, 15.Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita, Japan, 16.Center for Infectious Disease Education and Research (CiDER), Osaka University, Suita, Japan, 17.Laboratory for Systems Genetics, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan, 18.Department of Genome Informatics, Graduate School of Medicine, the University of Tokyo, Tokyo, Japan)

[OE5-3]Biological and host genetic mechanism of COVID-19 severity identified using large-scale scRNA-seq in Japanese

Ryuya Edahiro1, Yuya Shirai1, Yusuke Takeshima2, Shuhei Sakakibara2, Yuta Yamaguchi1,2, Teruaki Murakami1,2, Takayoshi Morita1,2, Yasuhiro Kato1,2, Yu-Chen Liu2, Daisuke Motooka2, Ayako Takuwa2, James Wing2, Kyuto Sonehara1,3,4, Japan COVID-19 Task Force, Namkoong Ho5, Hiromu Tanaka5, Ho Lee5, Koichi Fukunaga5, Haruhiko Hirata1, Yoshito Takeda1, Daisuke Okuzaki2, Atsushi Kumanogoh1,2, Yukinori Okada1,2,3,4 (1.Osaka University Graduate School of Medicine, Suita, Japan, 2.Immunology Frontier Research Center, Osaka University, Suita, Japan, 3.Graduate School of Medicine, the University of Tokyo, Tokyo, Japan, 4.RIKEN Center for Integrative Medical Sciences, Yokohama, Japan, 5.Keio University School of Medicine, Tokyo, Japan)

[OE5-4]Prokaryotic and viral genome recovered from 787 Japanese gut metagenomes revealed population-specific microbial features

Yoshihiko Tomofuji1, Toshihiro Kishikawa1, Yuichi Maeda1, Kotaro Ogawa 1, Yuriko Otake1, Shuhei Kawabata1, Takuro Nii 1, Tatsusada Okuno1(Tatsusada Okuno), Eri Oguro-Igashira 1, Makoto Kinoshita 1, Masatoshi Takagaki 1, Naoki Oyama 3, Kenichi Todo 1, Kenichi Yamamoto 1, Kyuto Sonehara1, Mayu Yagita1, Akiko Hosokawa4, Daisuke Motooka2, Yuki Matsumoto 2, Hidetoshi Matsuoka7, Maiko Yoshimura7, Shiro Ohshima7, Shinichiro Shinzaki1, Shota Nakamura 2, Hideki Iijima1, Hidenori Inohara1, Haruhiko Kishima1, Tetsuro Takehara1, Hideki Mochizuki1, Kiyoshi Takeda1, Atsushi Kumanogoh1, Yukinori Okada1,5,6 (1.Osaka University Graduate School of Medicine, Osaka, Japan, 2 Research Institute for Microbial Diseases, Osaka University, Suita, Japan, 3 Kawasaki Medical School, Kurashiki, Japan, 4 Suita Municipal Hospital, Suita, Japan, 5 Graduate School of Medicine, The University of Tokyo, Hongo, Japan, 6 RIKEN Center for Integrative Medical Sciences, Tsurumi, Japan, 7 NHO Osaka Minami Medical Center, Kawachinagano, Japan)